Membrane protein simulations with a united-atom lipid and all-atom protein model: lipid–protein interactions, side chain transfer free energies and model proteins
Arguments on using combination of OPLS and united-atom force field in GROMACS.
1) http://mccammon.ucsd.edu/~
Explicit Membrane Protein Simulations in NAMD/VMD
Transmembrane protein modeling manual. Human glycophorin (1AFO) made with NAMD software.
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